miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|229418069|gb|GO648972.1|GO648972 GGGGGGACAGACAAGAACCTGGTACAAGCACTCAGACAGCCAGGTTACAAAGATAGAAAGAGGGTGAAAAGAAACACGTT
TTAGAGTGACTGAAGCACTTAGGCTTCAGCTGGGGGTTCAGGAGGGATTGTTTTTCAGACGGTGGAGAGGATTGAGGCTG
GAAATCAGAAGACATCAAGAGGACCAAACCAGTAAATTCAATACTAATCGAGCAGGAAGAGATTCGCAGACAGTTGGATT
TTATTGGTGTATAAAAGCAATTCAACAGTGAATGTTGGACAACAGACCAAAGTCAGCTGTGAGAGAAGCTGCTGAAGACG
GGATCCCTAAGGAGGAACAACCGTACCCATTTTTCTAACCTTGGCTTCTGGTTCTTCTTCTTCTTGACTAACTCAACTTT
TGACAGTGTCAGTCATGTCGGAGGAAGAAGAGTTGTCCTACAGCGAAGCCATTAAGAAGGCGAGCACTTCCATCTCTCGC
TTCCCTCTCATCCCAGTCAGAGGAATTCCTCTCATGTCCTTCATCGCCAACAACTGGGACTCCATCTGGGCTTTCCGTCC
TGACCCCTCAGACCTCCTCATCGCCACATACCCCAAAGCAGGGACCACATGGACCCAGGAGATAGTTGACCTACTTCTTC
ACAACGGAGATGCTGAGGCCTGCAAACGAGCCCCGACACCCGTCCGCAGTCCTTTCCTAGAGATCTTCTCTCCACCACCC
ATTCCTTCAGGTCTTGATCATCTGAAAACCATGGATCCTCCAAGGATTATCAAGACACATCTTCCTTTTCAGTTGGTGCC
TACAGGATTTTGGGAAAACAAGTGCAAGGTTATTTACGTGGCACGCAATGCCAAAGACAACCTGGTGAGCTACTTCTACT
TTG




Most similar to sp|Q80VR3|ST1C1_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q80VR3|ST1C1_MOUSE Sulfotransferase 1C1 OS=Mus musculus
           GN=Sult1c1 PE=1 SV=1
          Length = 304

 Score =  160 bits (406), Expect = 9e-39
 Identities = 74/129 (57%), Positives = 92/129 (71%)
 Frame = +1

Query: 496 VRGIPLMSFIANNWDSIWAFRPDPSDLLIATYPKAGTTWTQEIVDLLLHNGDAEACKRAP 675
           V GI +   ++ NWD IW F+  P DLLIATY KAGTTWTQEIVD++ ++GD + C+RA 
Sbjct: 23  VNGILMSKMMSENWDKIWNFQAKPDDLLIATYAKAGTTWTQEIVDMIQNDGDVQKCQRAN 82

Query: 676 TPVRSPFLEIFSPPPIPSGLDHLKTMDPPRIIKTHLPFQLVPTGFWENKCKVIYVARNAK 855
           T  R PF+E   PPP+ SGLD    M  PR +KTHLP Q++P  FW+   K+IYVARNAK
Sbjct: 83  TYDRHPFIEWTLPPPLNSGLDLANKMPSPRTLKTHLPVQMLPPSFWKENSKIIYVARNAK 142

Query: 856 DNLVSYFYF 882
           D LVSY+YF
Sbjct: 143 DCLVSYYYF 151